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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs4991133 chr17:48102708 T/C PRHOXNB chr13:28552243-28562774:- -0.62 -8 1.29E-10 Box Plot
ACC rs499639 chr1:5330867 G/C OR6C3 chr12:55725485-55726420:+ 0.71 7.59 5.68E-10 Box Plot
ACC rs55639745 chr13:105094291 C/G DUPD1 chr10:76797594-76818272:- 1.18 10.3 3.76E-14 Box Plot
ACC rs55689538 chr3:107813286 C/T PRHOXNB chr13:28552243-28562774:- 0.73 9.48 6.42E-13 Box Plot
ACC rs55825883 chr5:14086275 G/A PRHOXNB chr13:28552243-28562774:- 0.61 8.22 5.63E-11 Box Plot
ACC rs56040137 chr15:54580692 C/CT ASZ1 chr7:117003276-117068177:- 1.3 7.67 4.18E-10 Box Plot
ACC rs56070475 chr13:33561892 A/G PRHOXNB chr13:28552243-28562774:- 0.67 8.06 1.01E-10 Box Plot
ACC rs56085218 chr3:64874876 G/C SILV chr12:56347890-56360458:- 1.13 7.6 5.47E-10 Box Plot
ACC rs56121794 chr2:234248753 C/T PRAMEF6 chr1:12998302-13007406:- 0.67 7.94 1.61E-10 Box Plot
ACC rs56146948 chr6:25384646 T/A TFDP3 chrX:132350697-132352376:- 0.94 10.27 4.12E-14 Box Plot
ACC rs56188129 chr20:60981156 C/A PRAMEF16 chr1:13495254-13498260:+ 0.62 7.67 4.21E-10 Box Plot
ACC rs56198604 chr9:96538031 TCA/T PLEKHA7 chr11:16798864-17035990:- 1.1 7.56 6.36E-10 Box Plot
ACC rs56388046 chr7:27542022 T/C PRHOXNB chr13:28552243-28562774:- 0.63 7.8 2.6E-10 Box Plot
ACC rs56673092 chr1:1210848 G/A DUPD1 chr10:76797594-76818272:- 0.8 7.69 3.89E-10 Box Plot
ACC rs56805242 chr2:16874337 A/T TFDP3 chrX:132350697-132352376:- 1.08 8.56 1.68E-11 Box Plot